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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs10562526 chr4:68300499 TA/T 1.97E-6 485 15.3 42.62 37.47 KM Plot
KIRC rs1063571 chr2:67632214 C/T 2.2E-7 507 37.33 37.7 2.03 KM Plot
KIRC rs10649301 chr4:68295770 G/GAATA 6.32E-5 502 18.4 43.85 37.03 KM Plot
KIRC rs10659031 chr4:12935374 C/CAT 3.1E-5 503 36.97 43.95 3.53 KM Plot
KIRC rs10734404 chr11:1517541 T/C 8.53E-5 507 5.47 37.37 37.33 KM Plot
KIRC rs10737936 chr2:191469731 T/C 0.000102 506 29.23 27.92 40.78 KM Plot
KIRC rs10742185 chr11:1501670 G/C 8.43E-5 507 5.47 37.53 37.33 KM Plot
KIRC rs1077713 chr9:98499823 C/G 1.64E-7 498 37.33 38.85 0.5 KM Plot
KIRC rs10819322 chr9:130712491 T/C 8.3E-5 501 1.8 29.78 37.88 KM Plot
KIRC rs10827115 chr10:33015216 G/A 3.31E-6 506 37.37 37.63 7.33 KM Plot
KIRC rs10827116 chr10:33017782 C/T 3.31E-6 506 37.37 37.63 7.33 KM Plot
KIRC rs10895874 chr11:105633373 A/G 7.99E-5 502 34.65 47.82 20.6 KM Plot
KIRC rs11009024 chr10:32955355 G/A 3.31E-6 505 37.57 37.5 7.33 KM Plot
KIRC rs11009025 chr10:32956652 C/T 3.31E-6 505 37.57 37.5 7.33 KM Plot
KIRC rs11009026 chr10:32959843 G/A 3.31E-6 505 37.57 37.5 7.33 KM Plot